Publications

Aidukas T, Phillips NW, Diaz A, Poghosyan E, Müller E, Levi AFJ, et al.
High-performance 4-nm-resolution X-ray tomography using burst ptychography
Nature. 2024; 632(8023): 81-88. https://doi.org/10.1038/s41586-024-07615-6
DORA PSI

Appel C, Aliyah K, Lazaridis T, Prehal C, Ammann M, Xu L, et al.
Operando scanning small-/wide-angle X-ray scattering for polymer electrolyte fuel cells: investigation of catalyst layer saturation and membrane hydration- capabilities and challenges
ACS Applied Materials and Interfaces. 2024; 16: 25938-25952. https://doi.org/10.1021/acsami.3c11173
DORA PSI

Björn L, Persson Jutemar E, Melhado Mazza R, Andreasson E, Linell F, Guizar-Sicairos M, et al.
Process-induced structures of injection-molded high-density polyethylene─Combining X-ray scattering and finite element modeling
ACS Applied Polymer Materials. 2024; 6(8): 4852-4864. https://doi.org/10.1021/acsapm.4c00581
DORA PSI

Gao Z, Appel C, Holler M, Jeschonek K, Brunnengräber K, Etzold BJM, et al.
Dynamic sparse x-ray nanotomography reveals ionomer hydration mechanism in polymer electrolyte fuel-cell catalyst
Science Advances. 2024; 10(41): eadp3346 (14 pp.). https://doi.org/10.1126/sciadv.adp3346
DORA PSI

Jørgensen PS, Besley L, Slyamov AM, Diaz A, Guizar-Sicairos M, Odstrčil M, et al.
Hard x-ray grazing-incidence ptychography: large field-of-view nanostructure imaging with ultra-high surface sensitivity
Optica. 2024; 11(2): 197-204. https://doi.org/10.1364/OPTICA.505478
DORA PSI

Maldanis L, Fernandez-Remolar D, Lemelle L, Knoll AH, Guizar-Sicairos M, Holler M, et al.
Unveiling challenging microbial fossil biosignatures from Rio Tinto with micro-to-nanoscale chemical and ultrastructural imaging
Astrobiology. 2024; 24(7): 721-733. https://doi.org/10.1089/ast.2023.0127
DORA PSI

Rudolph-Schöpping G, Larsson E, Pingel TN, Guizar-Sicairos M, Villanueva-Perez P, Hall S, et al.
Towards multiscale X-ray tomographic imaging in membrane science - a perspective
Journal of Membrane Science. 2024; 690: 122245 (16 pp.). https://doi.org/10.1016/j.memsci.2023.122245
DORA PSI

Weber CC, De Angelis S, Meinert R, Appel C, Holler M, Guizar-Sicairos M, et al.
Microporous transport layers facilitating low iridium loadings in polymer electrolyte water electrolysis
EES Catalysis. 2024; 2(2): 585-602. https://doi.org/10.1039/d3ey00279a
DORA PSI

Xu W, Ning S, Sheng P, Lin H, Kirkland AI, Peng Y, et al.
A high-performance reconstruction method for partially coherent ptychography
Ultramicroscopy. 2024; 267: 114068 (13 pp.). https://doi.org/10.1016/j.ultramic.2024.114068
DORA PSI

Aliyah K, Prehal C, Diercks JS, Diklić N, Xu L, Ünsal S, et al.
Quantification of PEFC catalyst layer saturation via in silico, ex situ, and in situ small-angle X-ray scattering
ACS Applied Materials and Interfaces. 2023; 15(22): 26538-26553. https://doi.org/10.1021/acsami.3c00420
DORA PSI

Björn L, Melhado Mazza R, Andreasson E, Linell F, Lutz-Bueno V, Guizar-Sicairos M, et al.
Scanning small-angle X-ray scattering of injection-molded polymers: anisotropic structure and mechanical properties of low-density polyethylene
ACS Applied Polymer Materials. 2023; 5(8): 6429-6440. https://doi.org/10.1021/acsapm.3c01007
DORA PSI

Casanova EA, Rodriguez-Palomo A, Stähli L, Arnke K, Gröninger O, Generali M, et al.
SAXS imaging reveals optimized osseointegration properties of bioengineered oriented 3D-PLGA/aCaP scaffolds in a critical size bone defect model
Biomaterials. 2023; 294: 121989 (17 pp.). https://doi.org/10.1016/j.biomaterials.2022.121989
DORA PSI

De Angelis S, Schuler T, Sabharwal M, Holler M, Guizar-Sicairos M, Müller E, et al.
Understanding the microstructure of a core-shell anode catalyst layer for polymer electrolyte water electrolysis
Scientific Reports. 2023; 13(1): 4280 (11 pp.). https://doi.org/10.1038/s41598-023-30960-x
DORA PSI

Georgiadis M, Menzel M, Reuter JA, Born DE, Kovacevich SR, Alvarez D, et al.
Imaging crossing fibers in mouse, pig, monkey, and human brain using small-angle X-ray scattering
Acta Biomaterialia. 2023; 164: 317-331. https://doi.org/10.1016/j.actbio.2023.04.029
DORA PSI

Kang I, Jiang Y, Holler M, Guizar-Sicairos M, Levi AFJ, Klug J, et al.
Accelerated deep self-supervised ptycho-laminography for three-dimensional nanoscale imaging of integrated circuits
Optica. 2023; 10(8): 1000-1008. https://doi.org/10.1364/OPTICA.492666
DORA PSI

Lo Re G, Engel ER, Björn L, Guizar Sicairos M, Liebi M, Wahlberg J, et al.
Melt processable cellulose fibres engineered for replacing oil-based thermoplastics
Chemical Engineering Journal. 2023; 458: 141372 (8 pp.). https://doi.org/10.1016/j.cej.2023.141372
DORA PSI

Nielsen LC, Erhart P, Guizar-Sicairos M, Liebi M
Small-angle scattering tensor tomography algorithm for robust reconstruction of complex textures
Acta Crystallographica Section A: Foundations and Advances. 2023; 79(6): 515-526. https://doi.org/10.1107/S205327332300863X
DORA PSI

Corona PT, Berke B, Guizar-Sicairos M, Leal LG, Liebi M, Helgeson ME
Fingerprinting soft material nanostructure response to complex flow histories
Physical Review Materials. 2022; 6(4): 045603 (14 pp.). https://doi.org/10.1103/PhysRevMaterials.6.045603
DORA PSI

Finnilä MAJ, Das Gupta S, Turunen MJ, Hellberg I, Turkiewicz A, Lutz‐Bueno V, et al.
Mineral crystal thickness in calcified cartilage and subchondral bone in healthy and osteoarthritic human knees
Journal of Bone and Mineral Research. 2022; 37(9): 1700-1710. https://doi.org/10.1002/jbmr.4642
DORA PSI

Holler M, Aidukas T, Heller L, Appel C, Phillips NW, Müller-Gubler E, et al.
Environmental control for X-ray nanotomography
Journal of Synchrotron Radiation. 2022; 29: 1223-1231. https://doi.org/10.1107/S1600577522006968
DORA PSI

Li M, Ihli J, Verheijen MA, Holler M, Guizar-Sicairos M, van Bokhoven JA, et al.
Alumina-supported NiMo hydrotreating catalysts aspects of 3D structure, synthesis, and activity
Journal of Physical Chemistry C. 2022; 126(43): 18536-18549. https://doi.org/10.1021/acs.jpcc.2c05927
DORA PSI

Wu Q, Soppa K, Müller E, Müller J, Odstrcil M, Tsai EHR, et al.
A modern look at a medieval bilayer metal leaf: nanotomography of Zwischgold
Nanoscale. 2022; 14(40): 15165-15180. https://doi.org/10.1039/D2NR03367D
DORA PSI

Appel C, Jeschonek K, Brunnengräber K, Etzold BJM, Liebi M, Guizar-Sicairos M
Towards a better understanding of structure-performance relation in PEMFC fuel cells based on ptychography X-ray nanotomography and scanning small angle X-ray scattering
Presented at: 25th congress and general assembly of the international union of crystallography (IUCr 2021); August 14-22, 2021; Prague, Czech Republic.
DORA PSI

Atakul-Özdemir A, Warren X, Martin PG, Guizar-Sicairos M, Holler M, Marone F, et al.
X-ray nanotomography and electron backscatter diffraction demonstrate the crystalline, heterogeneous and impermeable nature of conodont white matter
Royal Society Open Science. 2021; 8(8): 202013 (10 pp.). https://doi.org/10.1098/rsos.202013
DORA PSI

Chen Z, Jiang Y, Shao Y-T, Holtz ME, Odstrčil M, Guizar-Sicairos M, et al.
Electron ptychography achieves atomic-resolution limits set by lattice vibrations
Science. 2021; 372(6544): 826-831. https://doi.org/10.1126/science.abg2533
DORA PSI

Donnelly C, Metlov KL, Scagnoli V, Guizar-Sicairos M, Holler M, Bingham NS, et al.
Experimental observation of vortex rings in a bulk magnet
Nature Physics. 2021; 17: 316-321. https://doi.org/10.1038/s41567-020-01057-3
DORA PSI

Gao Z, Odstrcil M, Böcklein S, Palagin D, Holler M, Ferreira Sanchez D, et al.
Sparse X-ray hyperspectral tomography for nanoscopic compositional analysis of VPO catalysts
In: OSA imaging and applied optics congress 2021 (3D, COSI, DH, ISA, pcAOP). Washington, DC: OSA; 2021:CTu2H.6 (2 pp.). https://doi.org/10.1364/COSI.2021.CTu2H.6
DORA PSI

Gao Z, Odstrcil M, Böcklein S, Palagin D, Holler M, Ferreira Sanchez D, et al.
Sparse ab initio x-ray transmission spectrotomography for nanoscopic compositional analysis of functional materials
Science Advances. 2021; 7(24): eabf6971 (11 pp.). https://doi.org/10.1126/sciadv.abf6971
DORA PSI

Georgiadis M, Schroeter A, Gao Z, Guizar-Sicairos M, Liebi M, Leuze C, et al.
Nanostructure-specific X-ray tomography reveals myelin levels, integrity and axon orientations in mouse and human nervous tissue
Nature Communications. 2021; 12: 2941 (13 pp.). https://doi.org/10.1038/s41467-021-22719-7
DORA PSI

Gontsarik M, Mansour AB, Hong L, Guizar-Sicairos M, Salentinig S
pH-responsive aminolipid nanocarriers for antimicrobial peptide delivery
Journal of Colloid and Interface Science. 2021; 603: 398-407. https://doi.org/10.1016/j.jcis.2021.06.050
DORA PSI

Guizar-Sicairos M, Thibault P
Ptychography: a solution to the phase problem
Physics Today. 2021; 74(9): 42-48. https://doi.org/10.1063/PT.3.4835
DORA PSI

Holler M, Guizar-Sicairos M, Raabe J
State-of-the-art high-resolution 3D x-ray microscopy for imaging of integrated circuits
Electronic Device Failure Analysis. 2021; 23(2): 13-19.
DORA PSI

Liebi M, Lutz-Bueno V, Guizar-Sicairos M, Schönbauer BM, Eichler J, Martinelli E, et al.
3D nanoscale analysis of bone healing around degrading Mg implants evaluated by X-ray scattering tensor tomography
Acta Biomaterialia. 2021; 134: 804-817. https://doi.org/10.1016/j.actbio.2021.07.060
DORA PSI

Panneels V, Diaz A, Imsand C, Guizar-Sicairos M, Müller E, Bittermann AG, et al.
Imaging of retina cellular and subcellular structures using ptychographic hard X-ray tomography
Journal of Cell Science. 2021; 134(19): jcs258561 (8 pp.). https://doi.org/10.1242/jcs.258561
DORA PSI

Rodriguez-Palomo A, Lutz-Bueno V, Guizar-Sicairos M, Kádár R, Andersson M, Liebi M
Nanostructure and anisotropy of 3D printed lyotropic liquid crystals studied by scattering and birefringence imaging
Additive Manufacturing. 2021; 47: 102289 (9 pp.). https://doi.org/10.1016/j.addma.2021.102289
DORA PSI

Östergren I, Pourrahimi AM, Darmadi I, da Silva R, Stolaś A, Lerch S, et al.
Highly permeable fluorinated polymer nanocomposites for plasmonic hydrogen sensing
ACS Applied Materials and Interfaces. 2021; 13(18): 21724-21732. https://doi.org/10.1021/acsami.1c01968
DORA PSI

Donnelly C, Finizio S, Gliga S, Holler M, Hrabec A, Odstrčil M, et al.
Time-resolved imaging of three-dimensional nanoscale magnetization dynamics
Nature Nanotechnology. 2020; 15: 356-360. https://doi.org/10.1038/s41565-020-0649-x
DORA PSI

Gao Z, Holler M, Odstrcil M, Menzel A, Guizar-Sicairos M, Ihli J
Nanoscale crystal grain characterization via linear polarization X-ray ptychography
Chemical Communications. 2020; 56(87): 13373-13376. https://doi.org/10.1039/d0cc06101h
DORA PSI

Georgiadis M, Schroeter A, Gao Z, Guizar-Sicairos M, Novikov DS, Fieremans E, et al.
Retrieving neuronal orientations using 3D scanning SAXS and comparison with diffusion MRI
NeuroImage. 2020; 204: 116214 (11 pp.). https://doi.org/10.1016/j.neuroimage.2019.116214
DORA PSI

Grünewald TA, Liebi M, Wittig NK, Johannes A, Sikjaer T, Rejnmark L, et al.
Mapping the 3D orientation of nanocrystals and nanostructures in human bone: indications of novel structural features
Science Advances. 2020; 6(24): eaba4171 (7 pp.). https://doi.org/10.1126/sciadv.aba4171
DORA PSI

Guizar-Sicairos M, Georgiadis M, Liebi M
Validation study of small-angle X-ray scattering tensor tomography
Journal of Synchrotron Radiation. 2020; 27(3): 779-787. https://doi.org/10.1107/S1600577520003860
DORA PSI

Holler M, Odstrčil M, Guizar-Sicairos M, Lebugle M, Frommherz U, Lachat T, et al.
LamNI - an instrument for X-ray scanning microscopy in laminography geometry
Journal of Synchrotron Radiation. 2020; 27: 730-736. https://doi.org/10.1107/S1600577520003586
DORA PSI

Ihli J, Bloch L, Krumeich F, Wakonig K, Holler M, Guizar-Sicairos M, et al.
Hierarchical structure of NiMo hydrodesulfurization catalysts determined by ptychographic X‐ray computed tomography
Angewandte Chemie International Edition. 2020; 59(39): 17266-17271. https://doi.org/10.1002/anie.202008030
DORA PSI

Khayyeri H, Hammerman M, Turunen MJ, Blomgran P, Notermans T, Guizar-Sicairos M, et al.
Diminishing effects of mechanical loading over time during rat Achilles tendon healing
PLoS One. 2020; 15(12): e0236681 (18 pp.). https://doi.org/10.1371/journal.pone.0236681
DORA PSI

Le Cann S, Törnquist E, Silva Barreto I, Fraulob M, Albini Lomami H, Verezhak M, et al.
Spatio-temporal evolution of hydroxyapatite crystal thickness at the bone-implant interface
Acta Biomaterialia. 2020; 116: 391-399. https://doi.org/10.1016/j.actbio.2020.09.021
DORA PSI

Maldanis L, Hickman-Lewis K, Verezhak M, Gueriau P, Guizar-Sicairos M, Jaqueto P, et al.
Nanoscale 3D quantitative imaging of 1.88 Ga Gunflint microfossils reveals novel insights into taphonomic and biogenic characters
Scientific Reports. 2020; 10: 8163 (9 pp.). https://doi.org/10.1038/s41598-020-65176-w
DORA PSI

Polo CC, Pereira L, Mazzafera P, Flores-Borges DNA, Mayer JLS, Guizar-Sicairos M, et al.
Correlations between lignin content and structural robustness in plants revealed by X-ray ptychography
Scientific Reports. 2020; 10(1): 6023 (11 pp.). https://doi.org/10.1038/s41598-020-63093-6
DORA PSI

Tran HT, Tsai EHR, Lewis AJ, Moors T, Bol JGJM, Rostami I, et al.
Alterations in sub-axonal architecture between normal aging and Parkinson's diseased human brains using label-free cryogenic X-ray nanotomography
Frontiers in Neuroscience. 2020; 14: 570019 (22 pp.). https://doi.org/10.3389/fnins.2020.570019
DORA PSI

Wakonig K, Stadler H-C, Odstrčil M, Tsai EHR, Diaz A, Holler M, et al.
PtychoShelves, a versatile high-level framework for high-performance analysis of ptychographic data
Journal of Applied Crystallography. 2020; 53(2): 574-586. https://doi.org/10.1107/S1600576720001776
DORA PSI

Witte K, Späth A, Finizio S, Donnelly C, Watts B, Sarafimov B, et al.
From 2D STXM to 3D imaging: soft X-ray laminography of thin specimens
Nano Letters. 2020; 20(2): 1305-1314. https://doi.org/10.1021/acs.nanolett.9b04782
DORA PSI

Arboleda C, Lutz-Bueno V, Wang Z, Villanueva-Perez P, Guizar-Sicairos M, Liebi M, et al.
Assessing lesion malignancy by scanning small-angle x-ray scattering of breast tissue with microcalcifications
Physics in Medicine and Biology. 2019; 64(15): 155010 (9 pp.). https://doi.org/10.1088/1361-6560/ab2c36
DORA PSI

Gao Z, Guizar-Sicairos M, Lutz-Bueno V, Schröter A, Liebi M, Rudin M, et al.
High-speed tensor tomography: iterative reconstruction tensor tomography (IRTT) algorithm
Acta Crystallographica Section A: Foundations and Advances. 2019; 75: 223-238. https://doi.org/10.1107/S2053273318017394
DORA PSI

Holler M, Odstrcil M, Guizar-Sicairos M, Lebugle M, Müller E, Finizio S, et al.
Three-dimensional imaging of integrated circuits with macro- to nanoscale zoom
Nature Electronics. 2019; 2: 464-470. https://doi.org/10.1038/s41928-019-0309-z
DORA PSI

Odstrcil M, Holler M, Raabe J, Sepe A, Sheng X, Vignolini S, et al.
Ab initio nonrigid X-ray nanotomography
Nature Communications. 2019; 10: 2600 (9 pp.). https://doi.org/10.1038/s41467-019-10670-7
DORA PSI

Odstrčil M, Holler M, Raabe J, Guizar-Sicairos M
Alignment methods for nanotomography with deep subpixel accuracy
Optics Express. 2019; 27(25): 36637-36652. https://doi.org/10.1364/OE.27.036637
DORA PSI

Odstrčil M, Lebugle M, Guizar-Sicairos M, David C, Holler M
Towards optimized illumination for high-resolution ptychography
Optics Express. 2019; 27(10): 14981 (17 pp.). https://doi.org/10.1364/OE.27.014981
DORA PSI

Patil N, Narayanan T, Michels L, Skjønsfjell ETB, Guizar-Sicairos M, Van den Brande N, et al.
Probing organic thin films by coherent X-ray imaging and X-ray scattering
ACS Applied Polymer Materials. 2019; 1(7): 1787-1797. https://doi.org/10.1021/acsapm.9b00324
DORA PSI

Tsai EHR, Billaud J, F. Sanchez D, Ihli J, Odstrčil M, Holler M, et al.
Correlated X-ray 3D ptychography and diffraction microscopy visualize links between morphology and crystal structure of lithium-rich cathode materials
iScience. 2019; 11: 356-365. https://doi.org/10.1016/j.isci.2018.12.028
DORA PSI

Tsai EHR, Marone F, Guizar-Sicairos M
Gridrec-MS: an algorithm for multi-slice tomography
Optics Letters. 2019; 44(9): 2181-2184. https://doi.org/10.1364/OL.44.002181
DORA PSI

Wakonig K, Diaz A, Bonnin A, Stampanoni M, Bergamaschi A, Ihli J, et al.
X-ray Fourier ptychography
Science Advances. 2019; 5(2): eaav0282 (6 pp.). https://doi.org/10.1126/sciadv.aav0282
DORA PSI

Ciani A, Toumi H, Pallu S, Tsai EHR, Diaz A, Guizar-Sicairos M, et al.
Ptychographic X-ray CT characterization of the osteocyte lacuno-canalicular network in a male rat's glucocorticoid induced osteoporosis model
Bone Reports. 2018; 9: 122-131. https://doi.org/10.1016/j.bonr.2018.07.005
DORA PSI

Da Silva JC, Guizar-Sicairos M, Holler M, Diaz A, van Bokhoven JA, Bunk O, et al.
Quantitative region-of-interest tomography using variable field of view
Optics Express. 2018; 26(13): 16752-16768. https://doi.org/10.1364/OE.26.016752
DORA PSI

Deyhle H, White S, Botta L, Liebi M, Guizar-Sicairos M, Bunk O, et al.
Automated analysis of spatially resolved X-ray scattering and micro computed tomography of artificial and natural enamel carious lesions
Journal of Imaging. 2018; 4(6): 81 (13 pp.). https://doi.org/10.3390/jimaging4060081
DORA PSI

Donnelly C, Gliga S, Scagnoli V, Holler M, Raabe J, Heyderman LJ, et al.
Tomographic reconstruction of a three-dimensional magnetization vector field
New Journal of Physics. 2018; 20(8): 83009. https://doi.org/10.1088/1367-2630/aad35a
DORA PSI

Holler M, Raabe J, Diaz A, Guizar-Sicairos M, Tsai EHR, Odstrcil M, et al.
High-resolution 3D scanning X-ray microscopes at the Swiss Light Source
Microscopy and Microanalysis. 2018; 24(Suppl. 2): 168-170. https://doi.org/10.1017/S1431927618013223
DORA PSI

Holler M, Raabe J, Diaz A, Guizar-Sicairos M, Wepf R, Odstrcil M, et al.
OMNY – a tOMography Nano crYo stage
Review of Scientific Instruments. 2018; 89(4): 043706 (13 pp.). https://doi.org/10.1063/1.5020247
DORA PSI

Ihli J, Diaz A, Shu Y, Guizar-Sicairos M, Holler M, Wakonig K, et al.
Resonant ptychographic tomography facilitates three-dimensional quantitative colocalization of catalyst components and chemical elements
Journal of Physical Chemistry C. 2018; 122(40): 22920-22929. https://doi.org/10.1021/acs.jpcc.8b05624
DORA PSI

Langer M, Vaz CAF, Chiriotti S, Bergamaschi A, Guizar-Sicairos M, Kleibert A, et al.
Development of a new soft X-ray ptychography spectro-microscope at the Swiss Light Source (SLS)
Microscopy and Microanalysis. 2018; 24(Suppl. 2): 54-55. https://doi.org/10.1017/S1431927618012709
DORA PSI

Liebi M, Georgiadis M, Kohlbrecher J, Holler M, Raabe J, Usov I, et al.
Small-angle X-ray scattering tensor tomography: model of the three-dimensional reciprocal-space map, reconstruction algorithm and angular sampling requirements
Acta Crystallographica Section A: Foundations and Advances. 2018; 74(1): 12-24. https://doi.org/10.1107/S205327331701614X
DORA PSI

Lutz-Bueno V, Arboleda C, Leu L, Blunt MJ, Busch A, Georgiadis A, et al.
Model-free classification of X-ray scattering signals applied to image segmentation
Journal of Applied Crystallography. 2018; 51(5): 1378-1386. https://doi.org/10.1107/S1600576718011032
DORA PSI

Mathavan N, Turunen MJ, Guizar-Sicairos M, Bech M, Schaff F, Tägil M, et al.
The compositional and nano-structural basis of fracture healing in healthy and osteoporotic bone
Scientific Reports. 2018; 8(1): 1591 (12 pp.). https://doi.org/10.1038/s41598-018-19296-z
DORA PSI

Odstrcil M, Holler M, Raabe J, Guizar-Sicairos M
High resolution 3D imaging of integrated circuits by X-ray ptychography
In: Dhar NK, Dutta AK, eds. Image sensing technologies: materials, devices, systems, and applications V. Vol. 10656. Proceedings of SPIE. Bellingham, USA: SPIE; 2018:106560U (8 pp.). https://doi.org/10.1117/12.2304835
DORA PSI

Odstrčil M, Holler M, Guizar-Sicairos M
Arbitrary-path fly-scan ptychography
Optics Express. 2018; 26(10): 12585-12593. https://doi.org/10.1364/OE.26.012585
DORA PSI

Odstrčil M, Menzel A, Guizar-Sicairos M
Iterative least-squares solver for generalized maximum-likelihood ptychography
Optics Express. 2018; 26(3): 3108-3123. https://doi.org/10.1364/OE.26.003108
DORA PSI

Polo C, Pereira L, Flores D, Guizar-Sicairos M, Holler M, Mazzafera P, et al.
Lignin deposition in Arabidopsis thaliana cell walls unveiled by ptychographic X-ray computed tomography (PXCT)
Microscopy and Microanalysis. 2018; 24(Suppl. 2): 386-387. https://doi.org/10.1017/S1431927618014216
DORA PSI

Wilts BD, Sheng X, Holler M, Diaz A, Guizar-Sicairos M, Raabe J, et al.
Evolutionary-optimized photonic network structure in white beetle wing scales
Advanced Materials. 2018; 30(19): 1702057 (6 pp.). https://doi.org/10.1002/adma.201702057
DORA PSI

Donnelly C, Heyderman LJ, Gliga S, Guizar-Sicairos M
Röntgenblick für Magnete
Physik in unserer Zeit. 2017; 48: 266-267. https://doi.org/10.1002/piuz.201770604
DORA PSI

Donnelly C, Guizar-Sicairos M, Scagnoli V, Gliga S, Holler M, Raabe J, et al.
Three-dimensional magnetization structures revealed with X-ray vector nanotomography
Nature. 2017; 547(7663): 328-331. https://doi.org/10.1038/nature23006
DORA PSI

Gautieri A, Passini FS, Silván U, Guizar-Sicairos M, Carimati G, Volpi P, et al.
Advanced glycation end-products: mechanics of aged collagen from molecule to tissue
Matrix Biology. 2017; 59: 95-108. https://doi.org/10.1016/j.matbio.2016.09.001
DORA PSI

Holler M, Guizar-Sicairos M, Tsai EHR, Dinapoli R, Müller E, Bunk O, et al.
High-resolution non-destructive three-dimensional imaging of integrated circuits
Nature. 2017; 543(7645): 402-406. https://doi.org/10.1038/nature21698
DORA PSI

Ihli J, Jacob RR, Holler M, Guizar-Sicairos M, Diaz A, da Silva JC, et al.
A three-dimensional view of structural changes caused by deactivation of fluid catalytic cracking catalysts
Nature Communications. 2017; 8: 809 (10 pp.). https://doi.org/10.1038/s41467-017-00789-w
DORA PSI

Khayyeri H, Blomgran P, Hammerman M, Turunen MJ, Löwgren A, Guizar-Sicairos M, et al.
Achilles tendon compositional and structural properties are altered after unloading by botox
Scientific Reports. 2017; 7: 13067 (10 pp.). https://doi.org/10.1038/s41598-017-13107-7
DORA PSI

Lebugle M, Liebi M, Wakonig K, Guzenko VA, Holler M, Menzel A, et al.
High-acceptance versatile microfocus module based on elliptical Fresnel zone plates for small-angle X-ray scattering
Optics Express. 2017; 25(18): 21145-21158. https://doi.org/10.1364/OE.25.021145
DORA PSI

Mohacsi I, Vartiainen I, Rösner B, Guizar-Sicairos M, Guzenko VA, McNulty I, et al.
Interlaced zone plate optics for hard X-ray imaging in the 10 nm range
Scientific Reports. 2017; 7: 43624 (10 pp.). https://doi.org/10.1038/srep43624
DORA PSI

Shahmoradian SH, Tsai EHR, Diaz A, Guizar-Sicairos M, Raabe J, Spycher L, et al.
Three-dimensional imaging of biological tissue by cryo X-ray ptychography
Scientific Reports. 2017; 7: 6291 (12 pp.). https://doi.org/10.1038/s41598-017-05587-4
DORA PSI

Strelnikova N, Sauter N, Guizar-Sicairos M, Göllner M, Diaz A, Delivani P, et al.
Live cell X-ray imaging of autophagic vacuoles formation and chromatin dynamics in fission yeast
Scientific Reports. 2017; 7: 13775 (7 pp.). https://doi.org/10.1038/s41598-017-13175-9
DORA PSI

Turunen MJ, Khayyeri H, Guizar-Sicairos M, Isaksson H
Effects of tissue fixation and dehydration on tendon collagen nanostructure
Journal of Structural Biology. 2017; 199(3): 209-215. https://doi.org/10.1016/j.jsb.2017.07.009
DORA PSI

Van den Brande N, Patil N, Guizar-Sicairos M, Claessens R, Van Assche G, Breiby DW, et al.
Probing the bulk heterojunction morphology in thermally annealed active layers for polymer solar cells
Organic Electronics. 2017; 41: 319-326. https://doi.org/10.1016/j.orgel.2016.11.023
DORA PSI

Birkbak ME, Guizar-Sicairos M, Holler M, Birkedal H
Internal structure of sponge glass fiber revealed by ptychographic nanotomography
Journal of Structural Biology. 2016; 194(1): 124-128. https://doi.org/10.1016/j.jsb.2016.02.006
DORA PSI

Ciani A, Guizar-Sicairos M, Diaz A, Holler M, Pallu S, Achiou Z, et al.
Segmentation of nanotomographic cortical bone images for quantitative characterization of the osteoctyte lacuno-canalicular network
In: de Jonge MD, Paterson DJ, Ryan CG, eds. XRM 2014: proceedings of the 12th international conference on X-ray microscopy. Vol. 1696. AIP conference proceedings. sine loco: AIP Publishing; 2016:20040 (7 pp.). https://doi.org/10.1063/1.4937534
DORA PSI

Donnelly C, Scagnoli V, Guizar-Sicairos M, Holler M, Wilhelm F, Guillou F, et al.
High-resolution hard x-ray magnetic imaging with dichroic ptychography
Physical Review B. 2016; 94(6): 064421 (9 pp.). https://doi.org/10.1103/PhysRevB.94.064421
DORA PSI

Georgiadis M, Guizar-Sicairos M, Gschwend O, Hangartner P, Bunk O, Möller R, et al.
Ultrastructure organization of human trabeculae assessed by 3D sSAXS and relation to bone microarchitecture
PLoS One. 2016; 11(8): e0159838 (23 pp.). https://doi.org/10.1371/journal.pone.0159838
DORA PSI

Mohacsi I, Vartiainen I, Guizar-Sicairos M, Karvinen P, Guzenko VA, Müller E, et al.
Fabrication and characterization of highefficiency double-sided blazed X-ray optics
Optics Letters. 2016; 41(2): 281-284. https://doi.org/10.1364/OL.41.000281
DORA PSI

Patil N, Skjønsfjell ETB, Van den Brande N, Chavez Panduro EA, Claessens R, Guizar-Sicairos M, et al.
X-ray nanoscopy of a bulk heterojunction
PLoS One. 2016; 11(7): e0158345 (12 pp.). https://doi.org/10.1371/journal.pone.0158345
DORA PSI

Tsai EHR, Diaz A, Menzel A, Guizar-Sicairos M
X-ray ptychography using a distant analyzer
Optics Express. 2016; 24(6): 6441-6450. https://doi.org/10.1364/OE.24.006441
DORA PSI

Tsai EHR, Usov I, Diaz A, Menzel A, Guizar-Sicairos M
X-ray ptychography with extended depth of field
Optics Express. 2016; 24(25): 29089-29108. https://doi.org/10.1364/OE.24.029089
DORA PSI

Turunen MJ, Kaspersen JD, Olsson U, Guizar-Sicairos M, Bech M, Schaff F, et al.
Bone mineral crystal size and organization vary across mature rat bone cortex
Journal of Structural Biology. 2016; 195(3): 337-344. https://doi.org/10.1016/j.jsb.2016.07.005
DORA PSI

Vartiainen I, Mohacsi I, Stachnik K, Guizar-Sicairos M, David C, Meents A
Zernike x-ray ptychography
Optics Letters. 2016; 41(4): 721-724. https://doi.org/10.1364/OL.41.000721
DORA PSI

Villanueva-Perez P, Pedrini B, Mokso R, Guizar-Sicairos M, Arcadu F, Stampanoni M
Signal-to-noise criterion for free-propagation imaging techniques at free-electron lasers and synchrotrons
Optics Express. 2016; 24(4): 3189-3201. https://doi.org/10.1364/OE.24.003189
DORA PSI

Zhang F, Chen B, Morrison GR, Vila-Comamala J, Guizar-Sicairos M, Robinson IK
Phase retrieval by coherent modulation imaging
Nature Communications. 2016; 7: 13367. https://doi.org/10.1038/ncomms13367
DORA PSI

Bø Fløystad J, Skjønsfjell ETB, Guizar-Sicairos M, Høydalsvik K, He J, Andreasen JW, et al.
Quantitative 3D X-ray imaging of densification, delamination and fracture in a micro-composite under compression
Advanced Engineering Materials. 2015; 17(4): 545-553. https://doi.org/10.1002/adem.201400443
DORA PSI

Cunningham JA, Vargas K, Pengju L, Belivanova V, Marone F, Martínez-Pérez C, et al.
Critical appraisal of tubular putative eumetazoans from the Ediacaran Weng’an Doushantuo biota
Proceedings of the Royal Society B: Biological Sciences. 2015; 282(1812): 20151169 (9 pp.). https://doi.org/10.1098/rspb.2015.1169
DORA PSI

Diaz A, Malkova B, Holler M, Guizar-Sicairos M, Lima E, Panneels V, et al.
Three-dimensional mass density mapping of cellular ultrastructure by ptychographic X-ray nanotomography
Journal of Structural Biology. 2015; 192(3): 461-469. https://doi.org/10.1016/j.jsb.2015.10.008
DORA PSI

Donnelly C, Guizar-Sicairos M, Scagnoli V, Holler M, Huthwelker T, Menzel A, et al.
Element-specific X-ray phase tomography of 3D structures at the nanoscale
Physical Review Letters. 2015; 114(11): 115501 (5 pp.). https://doi.org/10.1103/PhysRevLett.114.115501
DORA PSI

Georgiadis M, Guizar-Sicairos M, Zwahlen A, Bunk O, Müller R, Schneider P
3D scanning SAXS: a novel method for the assessment of bone ultrastructure orientation
Bone. 2015; 71: 42-52. https://doi.org/10.1016/j.bone.2014.10.002
DORA PSI

Guizar-Sicairos M, Holler M, Diaz A, da Silva JC, Tsai EHR, Bunk O, et al.
Ptychographic nanotomography at the Swiss Light Source
In: Lai B, ed. X-ray nanoimaging: instruments and methods II. Vol. 9592. Proceedings of SPIE. Bellingham, WA, USA: SPIE; 2015:95920A (6 pp.). https://doi.org/10.1117/12.2188313
DORA PSI

Guizar-Sicairos M, Boon JJ, Mader K, Diaz A, Menzel A, Bunk O
Quantitative interior x-ray nanotomography by a hybrid imaging technique
Optica. 2015; 2(3): 259-266. https://doi.org/10.1364/OPTICA.2.000259
DORA PSI

Liebi M, Georgiadis M, Menzel A, Schneider P, Kohlbrecher J, Bunk O, et al.
Nanostructure surveys of macroscopic specimens by small-angle scattering tensor tomography
Nature. 2015; 527(7578): 349-352. https://doi.org/10.1038/nature16056
DORA PSI

Mohacsi I, Vartiainen I, Guizar-Sicairos M, Karvinen P, Guzenko VA, Müller E, et al.
High resolution double-sided diffractive optics for hard X-ray microscopy
Optics Express. 2015; 23(2): 776-786. https://doi.org/10.1364/OE.23.000776
DORA PSI

Pedersen EBL, Angmo D, Dam HF, Thydén KTS, Andersen TR, Skjønsfjell ETB, et al.
Improving organic tandem solar cells based on water-processed nanoparticles by quantitative 3D nanoimaging
Nanoscale. 2015; 7(32): 13765-13774. https://doi.org/10.1039/c5nr02824h
DORA PSI

Schaff F, Bech M, Zaslansky P, Jud C, Liebi M, Guizar-Sicairos M, et al.
Six-dimensional real and reciprocal space small-angle X-ray scattering tomography
Nature. 2015; 527: 353-356. https://doi.org/10.1038/nature16060
DORA PSI

Zanette I, Enders B, Dierolf M, Thibault P, Gradl R, Diaz A, et al.
Ptychographic X-ray nanotomography quantifies mineral distributions in human dentine
Scientific Reports. 2015; 5: 9210 (4 pp.). https://doi.org/10.1038/srep09210
DORA PSI

da Silva JC, Mader K, Holler M, Haberthür D, Diaz A, Guizar-Sicairos M, et al.
Assessment of the 3D pore structure and individual components of preshaped catalyst bodies by X-ray imaging
ChemCatChem. 2015; 7(3): 413-416. https://doi.org/10.1002/cctc.201402925
DORA PSI

da Silva JC, Trtik P, Diaz A, Holler M, Guizar-Sicairos M, Raabe J, et al.
Mass density and water content of saturated never-dried calcium silicate hydrates
Langmuir. 2015; 31(13): 3779-3783. https://doi.org/10.1021/la504478j
DORA PSI

Diaz A, Guizar-Sicairos M, Poeppel A, Menzel A, Bunk O
Characterization of carbon fibers using X-ray phase nanotomography
Carbon. 2014; 67: 98-103. https://doi.org/10.1016/j.carbon.2013.09.066
DORA PSI

Fessel G, Li Y, Diederich V, Guizar-Sicairos M, Schneider P, Sell DR, et al.
Advanced glycation end-products reduce collagen molecular sliding to affect collagen fibril damage mechanisms but not stiffness
PLoS One. 2014; 9(11): e110948 (12 pp.). https://doi.org/10.1371/journal.pone.0110948
DORA PSI

Guizar-Sicairos M, Johnson I, Diaz A, Holler M, Karvinen P, Stadler H-C, et al.
High-throughput ptychography using Eiger: scanning X-ray nano-imaging of extended regions
Optics Express. 2014; 22(12): 14859-14870. https://doi.org/10.1364/OE.22.014859
DORA PSI

Holler M, Diaz A, Guizar-Sicairos M, Karvinen P, Färm E, Härkönen E, et al.
X-ray ptychographic computed tomography at 16 nm isotropic 3D resolution
Scientific Reports. 2014; 4: 3857 (5 pp.). https://doi.org/10.1038/srep03857
DORA PSI

Johnson I, Bergamaschi A, Billich H, Cartier S, Dinapoli R, Greiffenberg D, et al.
Eiger: a single-photon counting x-ray detector
Journal of Instrumentation. 2014; 9(5): C05032 (8 pp.). https://doi.org/10.1088/1748-0221/9/05/C05032
DORA PSI

Karvinen P, Grolimund D, Willimann M, Meyer B, Birri M, Borca C, et al.
Kinoform diffractive lenses for efficient nanofocusing of hard X-rays
Optics Express. 2014; 22(14): 16676-16685. https://doi.org/10.1364/OE.22.016676
DORA PSI

Pelz PM, Guizar-Sicairos M, Thibault P, Johnson I, Holler M, Menzel A
On-the-fly scans for X-ray ptychography
Applied Physics Letters. 2014; 105(25): 251101 (5 pp.). https://doi.org/10.1063/1.4904943
DORA PSI

Thibault P, Guizar-Sicairos M, Menzel A
Coherent imaging at the diffraction limit
Journal of Synchrotron Radiation. 2014; 21(5): 1011-1018. https://doi.org/10.1107/S1600577514015343
DORA PSI

Vila-Comamala J, Sakdinawat A, Guizar-Sicairos M
Characterization of x-ray phase vortices by ptychographic coherent diffractive imaging
Optics Letters. 2014; 39(18): 5281-5284. https://doi.org/10.1364/OL.39.005281
DORA PSI

Chen B, Guizar-Sicairos M, Xiong G, Shemilt L, Diaz A, Nutter J, et al.
Three-dimensional structure analysis and percolation properties of a barrier marine coating
Scientific Reports. 2013; 3: 1177 (5 pp.). https://doi.org/10.1038/srep01177
DORA PSI

Esmaeili M, Fløystad JB, Diaz A, Høydalsvik K, Guizar-Sicairos M, Andreasen JW, et al.
Ptychographic X-ray tomography of silk fiber hydration
Macromolecules. 2013; 46(2): 434-439. https://doi.org/10.1021/ma3021163
DORA PSI

Lima E, Diaz A, Guizar-Sicairos M, Gorelick S, Pernot P, Schleier T, et al.
Cryo-scanning x-ray diffraction microscopy of frozen-hydrated yeast
Journal of Microscopy. 2013; 249(1): 1-7. https://doi.org/10.1111/j.1365-2818.2012.03682.x
DORA PSI

Menzel A, Diaz A, Guizar-Sicairos M
Ptychographic imaging at the Swiss Light Source
Synchrotron Radiation News. 2013; 26(2): 26-31. https://doi.org/10.1080/08940886.2013.771071
DORA PSI

Pedrini B, Menzel A, Guizar-Sicairos M, Guzenko VA, Gorelick S, David C, et al.
Two-dimensional structure from random multiparticle X-ray scattering images using cross-correlations
Nature Communications. 2013; 4: 1647 (9 pp.). https://doi.org/10.1038/ncomms2622
DORA PSI

Trtik P, Diaz A, Guizar-Sicairos M, Menzel A, Bunk O
Density mapping of hardened cement paste using ptychographic X-ray computed tomography
Cement and Concrete Composites. 2013; 36(1): 71-77. https://doi.org/10.1016/j.cemconcomp.2012.06.001
DORA PSI

Vila-Comamala J, Wojcik M, Diaz A, Guizar-Sicairos M, Kewish CM, Wang S, et al.
Angular spectrum simulation of X-ray focusing by Fresnel zone plates
Journal of Synchrotron Radiation. 2013; 20(3): 397-404. https://doi.org/10.1107/S090904951300263X
DORA PSI

Diaz A, Trtik P, Guizar-Sicairos M, Menzel A, Thibault P, Bunk O
Quantitative x-ray phase nanotomography
Physical Review B. 2012; 85(2): 020104 (4 pp.). https://doi.org/10.1103/PhysRevB.85.020104
DORA PSI

Guizar-Sicairos M, Holler M, Diaz A, Vila-Comamala J, Bunk O, Menzel A
Role of the illumination spatial-frequency spectrum for ptychography
Physical Review B. 2012; 86(10): 100103 (4 pp.). https://doi.org/10.1103/PhysRevB.86.100103
DORA PSI

Guizar-Sicairos M, Fienup JR
Understanding the twin-image problem in phase retrieval
Journal of the Optical Society of America A: Optics and Image Science, and Vision. 2012; 29(11): 2367-2375. https://doi.org/10.1364/JOSAA.29.002367
DORA PSI

Holler M, Raabe J, Diaz A, Guizar-Sicairos M, Quitmann C, Menzel A, et al.
An instrument for 3D x-ray nano-imaging
Review of Scientific Instruments. 2012; 83(7): 073703 (7 pp.). https://doi.org/10.1063/1.4737624
DORA PSI

Thibault P, Guizar-Sicairos M
Maximum-likelihood refinement for coherent diffractive imaging
New Journal of Physics. 2012; 14(6): 063004 (20 pp.). https://doi.org/10.1088/1367-2630/14/6/063004
DORA PSI

Guizar-Sicairos M, Narayanan S, Stein A, Metzler M, Sandy AR, Fienup JR, et al.
Measurement of hard x-ray lens wavefront aberrations using phase retrieval
Applied Physics Letters. 2011; 98(11): 111108 (3 pp.). https://doi.org/10.1063/1.3558914
DORA PSI

Guizar-Sicairos M, Diaz A, Menzel A, Bunk O
Methods and applications of X-ray phase nanotomography
In: Optics InfoBase conference papers. ; 2011:(1 pp.).
DORA PSI

Guizar-Sicairos M, Diaz A, Holler M, Lucas MS, Menzel A, Wepf RA, et al.
Phase tomography from x-ray coherent diffractive imaging projections
Optics Express. 2011; 19(22): 21345-21357. https://doi.org/10.1364/OE.19.021345
DORA PSI

Guizar-Sicairos M, Diaz A, Menzel A, Bunk O
X-ray phase nanotomography through ptychographic coherent lensless imaging
In: Rodríguez-Vera R, Díaz-Uribe R, eds. 22nd congress of the international commission for optics: light for the development of the world. Vol. 8011. Proceedings of SPIE. Bellingham, WA, USA: SPIE; 2011:80118F (3 pp.). https://doi.org/10.1117/12.903688
DORA PSI

Vila-Comamala J, Diaz A, Guizar-Sicairos M, Gorelick S, Guzenko VA, Karvinen P, et al.
Characterization of a 20-nm hard X-ray focus by ptychographic coherent diffractive imaging
In: Morawe C, Khounsary AM, Goto S, eds. Advances in X-ray/EUV optics and components VI. Vol. 8139. Proceedings of SPIE. Bellingham, WA, USA: SPIE; 2011:81390E (7 pp.). https://doi.org/10.1117/12.893235
DORA PSI

Vila-Comamala J, Diaz A, Guizar-Sicairos M, Mantion A, Kewish CM, Menzel A, et al.
Characterization of high-resolution diffractive X-ray optics by ptychographic coherent diffractive imaging
Optics Express. 2011; 19(22): 21333-21344. https://doi.org/10.1364/OE.19.021333
DORA PSI

Guizar-Sicairos M, Evans-Lutterodt K, Isakovic AF, Stein A, Warren JB, Sandy AR, et al.
One-dimensional hard x-ray field retrieval using a moveable structure
Optics Express. 2010; 18(17): 18374-18382. https://doi.org/10.1364/OE.18.018374
DORA PSI

Kewish CM, Guizar-Sicairos M, Liu C, Qian J, Shi B, Benson C, et al.
Reconstruction of an astigmatic hard X-ray beam and alignment of K-B mirrors from ptychographic coherent diffraction data
Optics Express. 2010; 18(22): 23420-23427. https://doi.org/10.1364/OE.18.023420
DORA PSI

Lee S, Guizar-Sicairos M
Validation of quantitative Ronchi test through numerical propagation
Optics Express. 2010; 18(18): 18525-18531. https://doi.org/10.1364/OE.18.018525
DORA PSI